=> Bootstrap dependency digest>=20010302: found digest-20080510
WARNING: [license.mk] Every package should define a LICENSE.
=> Checksum SHA1 OK for hmmer-2.3.2.tar.gz
=> Checksum RMD160 OK for hmmer-2.3.2.tar.gz
===> Installing dependencies for hmmer-2.3.2
=> Build dependency checkperms>=1.1: found checkperms-1.10
===> Overriding tools for hmmer-2.3.2
===> Extracting for hmmer-2.3.2
===> Patching for hmmer-2.3.2
=> Applying pkgsrc patches for hmmer-2.3.2
**************************************
Ignoring patch file /usr/pkgsrc/biology/hmmer/patches/patch-aa: invalid checksum
**************************************
ERROR: Patching failed due to modified or broken patch file(s):
ERROR: 	/usr/pkgsrc/biology/hmmer/patches/patch-aa
*** Error code 1

Stop.
bmake: stopped in /usr/pkgsrc/biology/hmmer
*** Error code 1

Stop.
bmake: stopped in /usr/pkgsrc/biology/hmmer