DragonFly On-Line Manual Pages

srf2fasta(1)                     Staden io_lib                    srf2fasta(1)

NAME
       srf2fasta - Converts SRF files to fasta format

SYNOPSIS
       srf2fasta  [-C] srf_archive

DESCRIPTION
       srf2fasta extracts sequences from an SRF archive and writes them in
       fasta format to stdout.

OPTIONS
       -C     Masks out sequences tagged as bad quality.

EXAMPLES
       To extract only the good quality sequences from runX.srf into
       runX.fasta.

           srf2fasta -C runX.srf > runX.fasta

AUTHOR
       James Bonfield, Wellcome Trust Sanger Institute

                                 September 19                     srf2fasta(1)