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gmx-wheel(1)                    GROMACS Manual                    gmx-wheel(1)

NAME

gmx-wheel - Plot helical wheels

SYNOPSIS

gmx wheel [-f [<.dat>]] [-o [<.eps>]] [-nice <int>] [-r0 <int>] [-rot0 <real>] [-T <string>] [-[no]nn]

DESCRIPTION

gmx wheel plots a helical wheel representation of your sequence. The input sequence is in the .dat file where the first line contains the number of residues and each consecutive line contains a residue name.

OPTIONS

Options to specify input and output files: -f [<.dat>] (nnnice.dat) (Input) Generic data file -o [<.eps>] (plot.eps) (Output) Encapsulated PostScript (tm) file Other options: -nice <int> (19) Set the nicelevel -r0 <int> (1) The first residue number in the sequence -rot0 <real> (0) Rotate around an angle initially (90 degrees makes sense) -T <string> Plot a title in the center of the wheel (must be shorter than 10 characters, or it will overwrite the wheel) -[no]nn (yes) Toggle numbers

SEE ALSO

gromacs(7) More information about GROMACS is available at <http://www.gromacs.org/>. VERSION 5.0.6 gmx-wheel(1)

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