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gmx-mk_angndx(1)                GROMACS Manual                gmx-mk_angndx(1)

NAME
       gmx-mk_angndx - Generate index files for 'gmx angle'

SYNOPSIS
       gmx mk_angndx [-s [<.tpr/.tpb/...>]] [-n [<.ndx>]] [-nice <int>]
                    [-type <enum>] [-[no]hyd] [-hq <real>]

DESCRIPTION
       gmx mk_angndx makes an index file for calculation of angle
       distributions etc. It uses a run input file (.tpx) for the definitions
       of the angles, dihedrals etc.

OPTIONS
       Options to specify input and output files:

       -s [<.tpr/.tpb/...>] (topol.tpr) (Input)
           Run input file: tpr tpb tpa

       -n [<.ndx>] (angle.ndx) (Output)
           Index file

       Other options:

       -nice <int> (0)
           Set the nicelevel

       -type <enum> (angle)
           Type of angle: angle, dihedral, improper, ryckaert-bellemans

       -[no]hyd  (yes)
           Include angles with atoms with mass  1.5

       -hq <real> (-1)
           Ignore angles with atoms with mass  1.5 and magnitude of their
       charge less than this value

SEE ALSO
       gromacs(7)

       More information about GROMACS is available at
       <http://www.gromacs.org/>.

VERSION 5.0.6                                                 gmx-mk_angndx(1)