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BP_TREE2PAG(1)        User Contributed Perl Documentation       BP_TREE2PAG(1)

NAME
       bp_tree2pag - convert Bio::TreeIO parseable format trees to pagel
       format

SYNOPSIS
        bp_tree2pag -if nexus -i file.nexus > file.pag

        # OR pipe in through STDIN, and use newick format instead

        cat file.newick | bp_tree2pag -if newick > file.nh

        # OR specify an output and input

        bp_tree2pag -o file.pag -i file.newick

DESCRIPTION
       Convert TreeIO parseable files into Pagel format tree files.  Be warned
       that pagel format only really supports a single tree per file so.  Also
       Pagel parsing is not yet available in bioperl.

perl v5.20.2                      2015-09-15                    BP_TREE2PAG(1)