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BP_MUTATE(1)          User Contributed Perl Documentation         BP_MUTATE(1)


NAME

       bp_mutate.pl - randomly mutagenize a single protein or DNA sequence


SYNOPSIS

         ./bp_mutate.pl -p 25 -i test.fa -n 5 -f swiss -o muts.swiss

         #or

         ./bp_mutate.pl --percent=25 --input=test.fa --number=5 -output=x.fa


DESCRIPTION

       Randomly mutagenize a single protein or DNA sequence one or more times.
       Specify percentage mutated and number of resulting mutant sequences.
       Print mutagenized sequences to STDOUT or write to an output file.

         -h|--help    Help
         -p|--percent Percent mutagenized
         -n|--number  Number of mutant sequences created
         -o|--output  Output file (optional)
         -f|--format  Output format (default: fasta)
         -i|--input   Input file


FEEDBACK

       User feedback is an integral part of the evolution of this and other
       Bioperl scripts. Send your comments and suggestions to the Bioperl
       mailing list.  Your participation is much appreciated.

         bioperl-l@bioperl.org                  - General discussion
         http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

   Reporting Bugs
       Report bugs to the Bioperl bug tracking system to help us keep track of
       the bugs and their resolution. Bug reports can be submitted via the
       web:

         https://github.com/bioperl/bioperl-live/issues


AUTHOR

       Brian Osborne, bosborne at alum.mit.edu

perl v5.20.2                      2015-09-15                      BP_MUTATE(1)

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